Publications

Klee D, Memmott T, Oken B. (2024). The Effect of Jittered Stimulus Onset Interval on Electrophysiological Markers of Attention in a Brain-Computer Interface Rapid Serial Visual Presentation Paradigm. Signals, 5(1), 18-39. https://doi.org/10.3390/signals5010002

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Fried-Oken M, Peters B, Vertanen K, Wade W. AAC interface design considerations for adults  with challenging alternative access needs. Workshop presented at: International Society for Augmentative and Alternative Communication Conference; Cancun, Mexico; 2023.

 

McMullen D, Dean H, Fried-Oken M, Hochberg L, Putrino D, Keszler M. Building consensus on clinical outcome assessments (COAs) for BCI devices. Workshop presented at: Tenth International BCI Society meeting; Brussels, Belgium; 2023.

 

Fried-Oken M, Peters B, Vertanen K, Wade W, Gibbons C. Examining alternative keyboards and language modeling software for message generation by BCI end-users. Workshop presented at: Tenth International Brain-Computer Interface Meeting; Brussels, Belgium; 2023.

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Gaines D, Vertanen K. Using a Pre-trained Neural Language Model to Make Character Predictions for Brain-Computer Interfaces. In: Tenth International BCI Meeting Abstract Book. Brussels, Belgium; 2023.

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Klee D, Memmott T, Oken B. Inter-stimulus latency jitter in RSVP Keyboard: Effects on attentional event-related potentials. In: Tenth International BCI Meeting Abstract Book. Brussels, Belgium; 2023.

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Memmott T, Klee D, Celik B, Peters B, Smedemark-Margulies N, Fried-Oken M, Oken B. Advancing artifact handling in BCI research: from filtering to non-neuronal artifacts. In: Tenth International BCI Meeting Abstract Book. Brussels, Belgium; 2023.

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Klein E, Kinsella M, Stevens I, Fried-Oken M.  Individuals with neurodegenerative disease discuss values about the speed-accuracy trade-off in communication BCIs. In: Tenth International BCI Meeting Abstract Book. Brussels, Belgium; 2023.

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Peters B, Celik B, Galvin-McLaughlin D, Imbiriba T, Kinsella M, Klee D, Lawhead M, Liu S, Memmott T, Smedemark-Margulies N, Erdogmus D, Oken B, Fried-Oken M. Combining EEG and switch input in RSVP Keyboard. In: Tenth International BCI Meeting Abstract Book. Brussels, Belgium; 2023.

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Smedemark-Margulies N, Celik B, Imbiriba T, Kocanaogullari A, Erdoğmuş D. Recursive estimation of user intent from noninvasive electroencephalography using discriminative models. In: ICASSP 2023-2023 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) 2023 Jun 4 (pp. 1-5).

 

Fried-Oken M, Peters B, Kinsella M. Clinical considerations for home use of non-implantable communication brain-computer interfaces. Webinar hosted by the US Society for Augmentative and Alternative Communication; 2023.

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Klein E, Kinsella M, Stevens I, Fried-Oken M. Ethical issues raised by incorporating personalized language models into brain-computer interface communication technologies: a qualitative study of individuals with neurological disease. Disability and Rehabilitation: Assistive Technology. 2022 Nov 17:1-1.

 

Gonzalez-Navarro P, Celik B, Moghadamfalahi M, Akcakaya M, Fried-Oken M, Erdoğmuş D. Feedback related potentials for eeg-based typing systems. Frontiers in Human Neuroscience. 2022 Jan 25;15:788258.

 

Fried-Oken, M. Considerations for user-centered design in brain-computer interfaces. Keynote presented at the BCI-CAN meeting. Alberta Children’s Hospital. Calgary, Alberta, Canada. 2022

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Memmott T & Fried-Oken M. Enhancing an open-source brain-computer interface software for greater adoption and physiologic data sharing. Presented at the NIH Software Tools for Open Science virtual meeting. 2022.

 

Peters B, Eddy B, Galvin-McLaughlin D, Betz G, Oken B, Fried-Oken M. A systematic review of research on augmentative and alternative communication brain-computer interface systems for individuals with disabilities. Frontiers in Human Neuroscience. 2022;16.

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Klee D, Memmott T, Smedemark-Margulies N, Celik B, Erdogmus D, Oken BS. Target-Related Alpha Attenuation in a Brain-Computer Interface Rapid Serial Visual Presentation Calibration. Frontiers in Human Neuroscience. 2022;16.

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Galvin-McLaughlin D, Klee D, Memmott T, Peters B, Wiedrick J, Fried-Oken M, Oken B, Erdogmus D, Smith D, Bedrick S, Eddy B. Methodology and preliminary data on feasibility of a neurofeedback protocol to improve visual attention to letters in mild Alzheimer's disease. Contemporary Clinical Trials Communications. 2022 Aug 1;28:100950.

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Klee D, Memmott T, Smedemark-Margulies N, Celik B, Erdogmus D, Oken B. Target-related alpha attenuation in a brain-computer interface (BCI) rapid serial visual presentation (RSVP) calibration task. Program No. P543.07. 2021 Neuroscience Meeting Planner. Chicago, IL: Society for Neuroscience. Online; 2021.

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McLaughlin DE, Peters B, Memmott T, Kinsella M, Fried-Oken M. User centered design influences the integration of multimodal access in an AAC-BCI system. Poster presented at International Society for Augmentative and Alternative Communication (ISAAC) Connect virtual conference. Online; 2021.

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Memmott T, Koçanaoğulları A, Lawhead M, Klee D, Dudy S, Fried-Oken M, et al. BciPy: Brain–computer interface software in Python. Brain-Computer Interfaces. 2021 Feb 3:1-8.

 

Peters B, Eddy B, Kinsella M, Klee D, McLaughlin D, Memmott T, Oken B, Fried-Oken M. Including participants with speech and physical impairments in BCI research: Challenges and lessons learned. In: Eighth International BCI Meeting Abstract Book. Online; 2021.

Erdogmus D, Kocanaogullari A, Marghi Y, Akcakaya M, Peters B, Oken B, Fried-Oken M. Active Recursive Bayesian Inference with log-Posterior Momentum for Faster BCIs. In: Eighth International BCI Meeting Abstract Book. Online; 2021.

 

Oken BS, Klee D, McLaughlin D, Memmott T, Fried-Oken M. The effects of using BCI software with posterior alpha rhythm neurofeedback (NFB) on cognitive processes underlying reading in persons with mild Alzheimer’s disease (AD). In: Eighth International BCI Meeting Abstract Book. Online; 2021.

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Memmott T, Kocanaogullari A, Klee D, Demir A, Erdogmus D, Oken B. Tripolar Scalp Electrodes Extract Gamma Activity to Maximize Performance in a Brain-Computer Interface (BCI) Spelling Paradigm. In: Eighth International BCI Meeting Abstract Book. Online; 2021.

Peters B, Bedrick S, Dudy S, Eddy B, Higger M, Kinsella M, et al. SSVEP BCI and eye tracking use by individuals with late-stage ALS and visual impairments. Frontiers in Human Neuroscience. 2020;14(101477954):595890.

Özdenizci O, Wang Y, Koike-Akino T, Erdoğmuş D. Learning invariant representations from EEG via adversarial inference. IEEE Access. 2020;8:27074–85.

Fried-Oken M, Kinsella M, Peters B, Eddy B, Wojciechowski B. Human visual skills for brain-computer interface use: a tutorial. Disability and Rehabilitation: Assistive Technology. 2020;15(7):799–809.

Özdenizci O, Wang Y, Koike-Akino T, Erdoğmuş D. Adversarial deep learning in EEG biometrics. IEEE Signal Processing Letters. 2019;26(5):710–4.

Özdenizci O, Erdoğmuş D. Information theoretic feature transformation learning for brain interfaces. IEEE Transactions on Biomedical Engineering. 2019;67(1):69–78.

Koch Fager S, Fried-Oken M, Jakobs T, Beukelman DR. New and emerging access technologies for adults with complex communication needs and severe motor impairments: State of the science. Augmentative and Alternative Communication. 2019;35(1):13–25.

Koçanaoğulları A, M. Marghi Y, Akçakaya M, Erdoğmuş D. An active recursive state estimation framework for brain-interfaced typing systems. Brain-Computer Interfaces. 2019;6(4):149–61.

Kadioglu B, Yildiz I, Closas P, Fried-Oken MB, Erdogmus D. Robust fusion of c-VEP and gaze. IEEE Sensors Letters. 2019;3(1).

Gonzalez-Navarro P, Marghi YM, Azari B, Akçakaya M, Erdoğmuş D. An event-driven AR-process model for EEG-based BCIs with rapid trial sequences. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2019;27(5):798–804.

Eddy BS, Garrett SC, Rajen S, Peters B, Wiedrick J, O’Connor A, et al. Trends in research participant categories and descriptions in abstracts from the International BCI Meeting series, 1999 to 2016. Brain-Computer Interfaces. 2019;6(1–2):13–24.

Peters B, Higger M, Quivira F, Bedrick S, Dudy S, Eddy B, et al. Effects of simulated visual acuity and ocular motility impairments on SSVEP brain-computer interface performance: An experiment with Shuffle Speller. Brain-Computer Interfaces. 2018;5(2–3):58–72.

Oken B, Memmott T, Eddy B, Wiedrick J, Fried-Oken M. Vigilance state fluctuations and performance using brain-computer interface for communication. Brain-Computer Interfaces. 2018;5(4):146–56.

Nezamfar H, Mohseni Salehi SS, Higger M, Erdogmus D. Code-VEP vs. eye tracking: A comparison study. Brain sciences. 2018;8(7):130.

Koçanaoğulları A, Marghi YM, Akçakaya M, Erdoğmuş D. Optimal query selection using multi-armed bandits. IEEE Signal Processing Letters. 2018;25(12):1870–4.

Koçanaoğulları A, Erdoğmuş D, Akçakaya M. On analysis of active querying for recursive state estimation. IEEE Signal Processing Letters. 2018;25(6):743–7.

 

Klein E, Peters B, Higger M. Ethical considerations in ending exploratory brain–computer interface research studies in locked-in syndrome. Cambridge Quarterly of Healthcare Ethics. 2018 Oct;27(4):660-74.

 

Kadıoğlu B, Yıldız İ, Closas P, Erdoğmuş D. M-estimation-based subspace learning for brain computer interfaces. IEEE Journal of Selected Topics in Signal Processing. 2018;12(6):1276–85.

 

Haghighi M, Moghadamfalahi M, Akcakaya M, Erdogmus D. EEG-assisted modulation of sound sources in the auditory scene. Biomedical Signal Processing and Control. 2018;39:263–70.

 

Ahani A, Moghadamfalahi M, Erdogmus D. Language-model assisted and icon-based communication through a brain–computer interface with different presentation paradigms. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2018;26(9):1835–44.

 

Peters B, Kinsella M, Eddy B, Mooney A, Fried-Oken M. A revised sensory/cognitive/communication screen for use with communication BCI study participants. In: Seventh International BCI Meeting Abstract Book. Pacific Grove, CA; 2018.

 

Memmott T, Koçanaoğulları A, Erdogmus D, Bedrick S, Peters B, Fried-Oken M. BciPy: A Python framework for brain-computer interface research. In: Seventh International BCI Meeting Abstract Book. Pacific Grove, CA; 2018.

 

Koçanaoğulları A, Gonzales-Navarro P, Memmott T, Peters B, Akcakaya M, Erdogmus D. Query exploration for intended task state estimation with BCI. In: Seventh International BCI Meeting Abstract Book. Pacific Grove, CA; 2018.

Garrett SC, Eddy B, Peters B, Rajen S, Huggins JE, Fried-Oken M. Trends in BCI meeting abstracts on research participant categories and descriptions between 1999 and 2013. In: Seventh International BCI Meeting Abstract Book. Pacific Grove, CA; 2018.

 

Fried-Oken M, Wojciechowski B, Kinsella M, Peters B, Eddy B, Erdogmus D, et al. Eye tracking, vision, and BCI. Workshop presented at: Seventh International Brain-Computer Interface Meeting; 2018; Pacific Grove, CA.

 

Eddy B, Peters B, Dudy S, Memmott T, Bedrick S, Fried-Oken M. Icons are not equal: Considerations for use of icons in BCI systems. In: Seventh International BCI Meeting Abstract Book. Pacific Grove, CA; 2018.

 

Moghadamfalahi M, Akcakaya M, Nezamfar H, Sourati J, Erdogmus D. An active RBSE framework to generate optimal stimulus sequences in a BCI for spelling. IEEE Transactions on Signal Processing. 2017;65(20):5381–92.

Haghighi M, Moghadamfalahi M, Akcakaya M, Shinn-Cunningham BG, Erdogmus D. A graphical model for online auditory scene modulation using EEG evidence for attention. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2017;25(11):1970–7.

Gonzalez-Navarro P, Moghadamfalahi M, Akçakaya M, Erdogmus D. Spatio-temporal EEG models for brain interfaces. Signal Processing. 2017;131:333–43.

Chavarriaga R, Fried-Oken M, Kleih S, Lotte F, Scherer R. Heading for new shores! Overcoming pitfalls in BCI design. Brain-Computer Interfaces. 2017;4(1–2):60–73.

Peters B, Mooney A, Oken B, Fried-Oken M. Soliciting BCI user experience feedback from people with severe speech and physical impairments. Brain-Computer Interfaces. 2016;3(1):47–58.

Orhan U, Nezamfar H, Akcakaya M, Erdogmus D, Higger M, Moghadamfalahi M, et al. Probabilistic simulation framework for EEG-based BCI design. Brain-Computer Interfaces. 2016;3(4):171–85.

Nezamfar H, Salehi SSM, Moghadamfalahi M, Erdogmus D. FlashTypeTM: A context-aware c-VEP-based BCI typing interface using EEG signals. IEEE Journal of Selected Topics in Signal Processing. 2016;10(5):932–41.

Higger M, Quivira F, Akcakaya M, Moghadamfalahi M, Nezamfar H, Cetin M, et al. Recursive Bayesian coding for BCIs. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2016;25(6):704–14.

Andresen EM, Fried-Oken M, Peters B, Patrick DL. Initial constructs for patient-centered outcome measures to evaluate brain-computer interfaces. Disability and Rehabilitation: Assistive Technology. 2016;11(7):548–57.

Peters B, Mooney A, Fried-Oken M. Communication Strategies to Involve Potential Users in BCI Research. In: Proceedings of the Sixth International Brain-Computer Interface Meeting. Pacific Grove, CA; 2016.

 

Memmott T, Peters B, Erdogmus D, Fried-Oken M, Oken B. Detecting Drowsiness in RSVP KeyboardTM BCI Users with SSPI. In: Proceedings of the Sixth International Brain-Computer Interface Meeting. Pacific Grove, CA; 2016.

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Peters B, Bieker G, Heckman SM, Huggins JE, Wolf C, Zeitlin D, et al. Brain-computer interface users speak up: the Virtual Users’ Forum at the 2013 International Brain-Computer Interface Meeting. Arch Phys Med Rehabil. 2015;96(3 Suppl):S33-7.

Moghadamfalahi M, Orhan U, Akcakaya M, Nezamfar H, Fried-Oken M, Erdogmus D. Language-Model Assisted Brain Computer Interface for Typing: A Comparison of Matrix and Rapid Serial Visual Presentation. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2015;23(5):910–20.

Fried-Oken M, Mooney A, Peters B. Supporting communication for patients with neurodegenerative disease. NeuroRehabilitation. 2015;37(1):69–87.

Fried-Oken M, Mooney A, Peters B, Oken B. A clinical screening protocol for the RSVP Keyboard brain-computer interface. Disability and rehabilitation: Assistive technology. 2015;10(1):11–8.

Peters B, Brumberg J, Mooney A, Zeitlin D, Fried-Oken M. State of the science update: Brain-computer interfaces for augmentative & alternative communication. Presentation at: American Speech-Language Hearing Association Convention; 2015; Denver, CO.

 

Oken BS, Orhan U, Roark B, Erdogmus D, Fowler A, Mooney A, et al. Brain-computer interface with language model-electroencephalography fusion for locked-in syndrome. Neurorehabilitation and Neural Repair. 2014;28(4):387–94.

Huggins JE, Guger C, Allison B, Anderson CW, Batista A, Brouwer A-M, et al. Workshops of the Fifth International Brain-Computer Interface Meeting: Defining the Future. Brain-Computer Interfaces. 2014;1(1):27–49.

Higger M, Akcakaya M, Nezamfar H, LaMountain G, Orhan U, Erdogmus D. A Bayesian framework for intent detection and stimulation selection in SSVEP BCIs. IEEE Signal Processing Letters. 2014;22(6):743–7.

Akcakaya M, Peters B, Moghadamfalahi M, Mooney AR, Orhan U, Oken B, et al. Noninvasive brain-computer interfaces for augmentative and alternative communication. IEEE Reviews in Biomedical Engineering. 2014;7(101493803):31–49.

Ahani A, Wiegand K, Orhan U, Akcakaya M, Moghadamfalahi M, Nezamfar H, et al. RSVP IconMessenger: icon-based brain-interfaced alternative and augmentative communication. Brain-Computer Interfaces. 2014;1(3–4):192–203.

Ahani A, Wahbeh H, Nezamfar H, Miller M, Erdogmus D, Oken B. Quantitative change of EEG and respiration signals during mindfulness meditation. Journal of Neuroengineering and Rehabilitation. 2014;11(1):1–11.

Orhan U, Erdogmus D, Roark B, Oken B, Fried-Oken M. Offline analysis of context contribution to ERP-based typing BCI performance. Journal of Neural Engineering. 2013;10(6):066003.

Peters B, Erdogmus D, Fowler A, Mooney A, Oken B, Orhan U, et al. Effects of varying presentation rate and sequence length on user performance with the RSVP Keyboard BCI. In: Proceedings of the Fifth International Brain-Computer Interface Meeting. 2013.

 

Peters B, Bieker G, Mooney A, Oken B, Fried-Oken M. Selection strategies for the RSVP Keyboard: Different strokes for different folks. In: Proceedings of the Fifth International Brain-Computer Interface Meeting. 2013.

 

Fried-Oken M, Mooney A, Oken B, Peters B. Clinical screening protocol for RSVP Keyboard BCI Use. In: Proceedings of the Fifth International Brain-Computer Interface Meeting. 2013.

Orhan U, Hild KE 2nd, Erdogmus D, Roark B, Oken B, Fried-Oken M. RSVP Keyboard: An EEG Based Typing Interface. In: Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP). United States; 2012.

Orhan U, Erdogmus D, Roark B, Oken B, Purwar S, Hild KE 2nd, et al. Improved accuracy using recursive Bayesian estimation based language model fusion in ERP-based BCI typing systems. In: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2012. p. 2497–500.

Orhan U, Erdogmus D, Roark B, Purwar S, Hild KE 2nd, Oken B, et al. Fusion with language models improves spelling accuracy for ERP-based brain computer interface spellers. In: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2011. p. 5774–7.

Orhan U, Erdogmus D, Hild KE 2nd, Roark B, Oken B, Fried-Oken M. Context Information Significantly Improves Brain Computer Interface Performance - a Case Study on Text Entry Using a Language Model Assisted BCI. In: Asilomar Conference on Signals, Systems & Computers. 2011. p. 132–6.

Nezamfar H, Orhan U, Purwar S, Hild K, Oken B, Erdogmus D. Decoding of multichannel EEG activity from the visual cortex in response to pseudorandom binary sequences of visual stimuli. International Journal of Imaging Systems and Technology. 2011;21(2):139–47.

Nezamfar H, Orhan U, Erdogmus D, Hild KE, Purwar S, Oken B, et al. On Visually Evoked Potentials in EEG Induced by Multiple Pseudorandom Binary Sequences for Brain Computer Interface Design. In: Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP). 2011. p. 2044–7.

Mak J, Arbel Y, Minett JW, McCane LM, Yuksel B, Ryan D, et al. Optimizing the P300-based brain–computer interface: current status, limitations and future directions. Journal of Neural Engineering. 2011;8(2):025003.

Huang Y, Erdogmus D, Pavel M, Mathan S, Hild II KE. A framework for rapid visual image search using single-trial brain evoked responses. Neurocomputing. 2011;74(12–13):2041–51.

Hild KE, Orhan U, Erdogmus D, Roark B, Oken B, Purwar S, et al. An ERP-based brain-computer interface for text entry using rapid serial visual presentation and language modeling. In Proceedings of the ACL-HLT 2011 System Demonstrations. 2011. p. 38–43.